Organisms shown here are known to initiate a EAWAG-BBD biodegradation pathway.
Other organisms not listed here may also initiate these or similar pathways or carry out later steps.
| Microorganism Name |
EAWAG-BBD Pathway |
As of January 29, 2025 at 4:16:54 PM CST , the EAWAG-BBD contains 543 entries for microorganism strains.
| Acetobacterium sp. LuTria 3 | Triethanolamine Pathway |
| Acetobacterium woodii | Carbon Tetrachloride (anaerobic) Pathway |
| Achromobacter xylosoxidans sp. xylosoxidans | Imidosuccinate Pathway |
| Achromobacter xylosoxidans subsp. denitrificans NTB-1 | 2,4-Dichlorobenzoate Pathway |
| Acinetobacter calcoaceticus | 3-Fluorobenzoate Pathway |
| Acinetobacter sp. BEM2 | 2-Chloro-N-isopropylacetanilide Pathway |
| Acinetobacter sp. NCIB 9871 | Cyclohexane Pathway |
| Actinomycetes spp. | Trinitrotoluene Pathway |
| Aeromonas sp. s45p1 | Phenanthrene Pathway |
| Agaricus bisporus | 4-Carboxy-4'-Sulfoazobenzene Pathway |
| Agrobacterium sp. J14a | Atrazine Pathway |
| Agrobacterium radiobacter | Dimethylphosphinate Pathway |
| Agrobacterium radiobacter | Glyphosate Pathway |
| Agrobacterium radiobacter AD1(pTB3) | 1,2,3-Tribromopropane Pathway |
| Agrobacterium sp. 35S | 4-Hydroxypyridine Pathway |
| Agrobacterium tumefaciens BY6 | Imidosuccinate Pathway |
| Alcaligenes eutrophus | 2,4-Dichlorophenoxyacetic Acid Pathway |
| Alcaligenes eutrophus 335 | 4-Fluorobenzoate (an/aerobic) Pathway |
| Alcaligenes eutrophus JMP134 | 4-Fluorobenzoate (an/aerobic) Pathway |
| Alcaligenes sp. AL3007 | 2,4-Dichlorobenzoate Pathway |
| Alcaligenes sp. NyZ215 | Nitrophenol Family (an/aerobic) Pathway |
| Alcaligenes sp. O-1 | 2-Aminobenzenesulfonate Pathway |
| Alcaligenes sp. O-1 | Toluene-4-sulfonate Pathway |
| Alcaligenes sp. SG1 | Atrazine Pathway |
| Aminobacter sp. O-1 | Dichlobenil Pathway |
| Anabaena sp. PCC7120 | gamma-1,2,3,4,5,6-Hexachlorocyclohexane Pathway |
| Ancylobacter aquaticus AD20 | 1,2-Dichloroethane Pathway |
| Ancylobacter aquaticus AD25 | 1,2-Dichloroethane Pathway |
| Ancylobacter aquaticus AD27 | 1,2-Dichloroethane Pathway |
| Anthracobia melaloma | 1,5-Anhydro-D-fructose (Fungal) Pathway |
| Aquamicrobium defluvii NKK | Thiophene-2-carboxylate Pathway |
| Aquaspirillum sp. 2C | 2,4-Dichloroaniline Pathway |
| Aromatoleum aromaticum EbN1 | Ethylbenzene (anaerobic) Pathway |
| Arthrobacter atrocyaneus | Glyphosate Pathway |
| Arthrobacter aurescens TC1 | Atrazine Pathway |
| Arthrobacter ilicis | Methyl tert-butyl ether Pathway |
| Arthrobacter keyseri 12B | Phthalate Family Pathway |
| Arthrobacter nicotinovorans (pAO1) | Nicotine Pathway |
| Arthrobacter nitroguajacolicus Ru61a | Quinaldine Pathway |
| Arthrobacter oxydans | Nicotine Pathway |
| Arthrobacter protophormiae RKJ100 | Nitrophenol Family (an/aerobic) Pathway |
| Arthrobacter sp. | Organosilicone (an/aerobic) Pathway |
| Arthrobacter sp. | 2,4-Dichlorophenoxyacetic Acid Pathway |
| Arthrobacter sp. | Tyrosine Pathway |
| Arthrobacter sp. 4-CB1 | 2,4-Dichlorobenzoate Pathway |
| Arthrobacter sp. AD2 | 1,3-Dichloro-2-propanol Pathway |
| Arthrobacter sp. CR-7 | Pyridoxine Pathway |
| Arthrobacter sp. DSM 20389 | Metamitron Pathway |
| Arthrobacter sp. F101 | Fluorene Pathway |
| Arthrobacter sp. JS443 | Nitrophenol Family (an/aerobic) Pathway |
| Arthrobacter sp. KW | Endosulfan Pathway |
| Arthrobacter sp. MA6 | Iprodione Pathway |
| Arthrobacter sp. Py1 (DSM 6386) | Pyrrole-2-carboxylate Pathway |
| Arthrobacter sp. Ru61a | Vanillin Pathway |
| Arthrobacter sp. SU | 2,4-Dichlorobenzoate Pathway |
| Arxula adeninivorans | Limonene Pathway |
| Aspergillus cellulosae | Limonene Pathway |
| Aspergillus flavus | Quercetin Pathway |
| Aspergillus niger | Benzoate Pathway |
| Aspergillus niger | 2-Aminobenzoate Pathway |
| Aspergillus niger | Quercetin Pathway |
| Aspergillus niger | Carbofuran Pathway |
| Aspergillus niger | 1,5-Anhydro-D-fructose (Fungal) Pathway |
| Aspergillus niger ATCC 6275 | Phenanthrene (fungal 9R,10R) Pathway |
| Aspergillus niger J/8 | Diazepam Pathway |
| Aspergillus tamarii | Caffeine (fungal) Pathway |
| Azoarcus sp. T | Toluene (anaerobic) Pathway |
| Azoarcus evansii | Benzoate (anaerobic) Pathway |
| Azoarcus evansii | Benzoate Pathway |
| Azotobacter chroococcum | 2,4-Dichlorophenoxyacetic Acid Pathway |
| Azotobacter vinelandii | Thiocyanate Pathway |
| Bacillus arseniciselenatis E-1H | Selenate Pathway |
| Bacillus brevis | Isoniazid Pathway |
| Bacillus halodurans | Thiamin Pathway |
| Bacillus megaterium PYR2910 | Pyrrole-2-carboxylate Pathway |
| Bacillus pallidus | alpha-Pinene Pathway |
| Bacillus sp. | Trinitrotoluene Pathway |
| Bacillus sp. OxB-1 | Z-Phenylacetaldoxime Pathway |
| Bacillus spp. | Isoniazid Pathway |
| Bacillus stearothermophilus | Limonene Pathway |
| Beijerinckia sp. | Acenaphthylene Pathway |
| Bjerkandera sp. BOS55 | Anthracene (fungal) Pathway |
| Bradyrhizobium japonicum | Nitrate (anaerobic) Pathway |
| Brevibacterium fuscum | Nitrobenzene Pathway |
| Brevibacterium sp. DPO 1361 | Dibenzofuran Pathway |
| Brevundimonas diminuta INMI KS-7 | 2,4-Dichloroaniline Pathway |
| Brevundimonas diminuta MG | Parathion (an/aerobic) Pathway |
| Burkholderia cepacia | Endosulfan Pathway |
| Burkholderia cepacia | Phthalate Family Pathway |
| Burkholderia cepacia | 2,4-Dichlorophenoxyacetic Acid Pathway |
| Burkholderia cepacia | 4-Fluorobenzoate (an/aerobic) Pathway |
| Burkholderia cepacia 2CBS | Benzoate Pathway |
| Burkholderia cepacia AC1100 | Pentachlorophenol Family Pathway |
| Burkholderia cepacia AC1100 | 2,4,5-Trichlorophenoxyacetic Acid Pathway |
| Burkholderia cepacia CAA1 | 3-Chloroacrylic Acid Pathway |
| Burkholderia cepacia CAA2 | 3-Chloroacrylic Acid Pathway |
| Burkholderia cepacia G4 | Toluene Pathway |
| Burkholderia cepacia G4 | Trichloroethylene Pathway |
| Burkholderia cepacia MB2 | o-Xylene Pathway |
| Burkholderia cepacia R34 | 2,4-Dinitrotoluene Pathway |
| Burkholderia sp. P51 | 1,2,4-Trichlorobenzene (an/aerobic) Pathway |
| Burkholderia sp. PS12 | 1,2,4-Trichlorobenzene (an/aerobic) Pathway |
| Burkholderia sp. strain JS165 | 3-Nitrotyrosine Family Pathway |
| Candida parapsilosis CBS604 | Nitrophenol Family (an/aerobic) Pathway |
| Chelatobacter heintzii ATCC 29600 | Nitrilotriacetate (an/aerobic) Pathway |
| Citrobacter sp. N14 | Uranium Pathway |
| Cladosporium sp. | Limonene Pathway |
| Clavibacter michiganense subsp. sepedonicum KZ-4 | 2,4-Dichlorobenzoate Pathway |
| Clavibacter sp. | Atrazine Pathway |
| Clostridium acetobutylicumW/Z-1T | 2,4,6-Trinitrotoluene (anaerobic) Pathway |
| Clostridium bifermentans ATCC 638 | 2,4,6-Trinitrotoluene (anaerobic) Pathway |
| Clostridium bifermentans KMR-1 | 2,4,6-Trinitrotoluene (anaerobic) Pathway |
| Clostridium hydroxybenzoicum JW/Z-1T | Phenol (anaerobic) Pathway |
| Clostridium pasteurianum | 2,4,6-Trinitrotoluene (anaerobic) Pathway |
| Clostridium sordellii ATCC 9714 | 2,4,6-Trinitrotoluene (anaerobic) Pathway |
| Clostridium sporogenes ATCC 11437 | 2,4,6-Trinitrotoluene (anaerobic) Pathway |
| Clostridium thermoaceticum | Carbon Tetrachloride (anaerobic) Pathway |
| Comamonas testosteroni 63 | 3-Methylquinoline Pathway |
| Comamonas testosteroni I-2 | 2,4-Dichloroaniline Pathway |
| Comamonas testosteroni JH5 | 2,4-Dichlorophenoxyacetic Acid Pathway |
| Comamonas testosteroni KF-1 | 3-(4-Sulfophenyl)butyrate Pathway |
| Comamonas testosteroni NH1000 | Phthalate Family Pathway |
| Comamonas testosteroni T-2 | Toluene-4-sulfonate Pathway |
| Comamonas testosteroni TA441 | Testosterone Pathway |
| Comamonas testosteroni YZW-D | Phthalate Family Pathway |
| Cordyceps sinensis | 1,4-Dioxane Pathway |
| Coriolus versicolor | Nitrofen Pathway |
| Corynebacterium sp. C125 | Tetralin Pathway |
| Corynebacterium sp. N-1074 | 1,3-Dichloro-2-propanol Pathway |
| Corynebacterium sp. SO1A | 2-Mercaptobenzothiazole Pathway |
| Cunninghamella elegans | Phenanthrene (fungal 9S,10S) Pathway |
| Cunninghamella elegans ATCC 9245 | Phenanthrene (fungal 9R,10R) Pathway |
| Curtobacterium sp. | Asulam Pathway |
| Dehalobacter restrictus | Tetrachloroethene (anaerobic) Pathway |
| Dehalobacter sp. | beta-1,2,3,4,5,6-Hexachlorocyclohexane (an/aerobic) Pathway |
| Dehalococcoides ethenogenes 195 | Tetrachloroethene (anaerobic) Pathway |
| Dehalospirillum multivorans | Tetrachloroethene (anaerobic) Pathway |
| Deinococcus radiodurans R1 | Uranium Pathway |
| Delftia acidovorans CA 28 | 2,4-Dichloroaniline Pathway |
| Delftia sp. AN3 | Nitrobenzene Pathway |
| Desulfitobacterium sp. PCE-S | Tetrachloroethene (anaerobic) Pathway |
| Desulfobacterium autotrophicum | Carbon Tetrachloride (anaerobic) Pathway |
| Desulfovibrio desulfuricans | Osmium Reduction Pathway |
| Desulfovibrio sp. | 2,4,6-Trinitrotoluene (anaerobic) Pathway |
| Desulfovibrio sp. TBP1 | Tetrabromobisphenol A Pathway |
| Desulfovibrio vulgaris | Uranium Pathway |
| Diaphorobacter sp. TPD-1 | Triazophos Pathway |
| Diatoms bacillariophyta | Tri-n-butyltin Pathway |
| Dinoflagellates pyrrhophyta | Tri-n-butyltin Pathway |
| Enterobacter aerogenes | Glyphosate Pathway |
| Enterobacter aerogenes | 1,1,1-Trichloro-2,2-bis-(4'-chlorophenyl)ethane (DDT) (anaerobic) Pathway |
| Enterobacter cloacae | Pentaerythritol tetranitrate Pathway |
| Escherichia coli | Carbazole Pathway |
| Escherichia coli | N-Methylmorpholine-N-oxide Pathway |
| Escherichia coli | Arsonoacetate Pathway |
| Escherichia coli | Methionine and Threonine Pathway |
| Escherichia coli | Nitrate (anaerobic) Pathway |
| Escherichia coli | 2,4,6-Trinitrotoluene (anaerobic) Pathway |
| Escherichia coli C600 | Starch Oligomer Pathway |
| Escherichia coli HB101 | 2-Mercaptobenzothiazole Pathway |
| Escherichia coli J53-1 | Organomercury Pathway |
| Escherichia coli K-12 | 3-Nitrotyrosine Family Pathway |
| Escherichia coli K-12 | Thiophene-2-carboxylate Pathway |
| Escherichia coli K-12 | 3-Phenylpropionate Pathway |
| Escherichia coli K-12 | Cinnamate Pathway |
| Eubacterium oxidoreducens | Gallate (anaerobic) Pathway |
| Exophiala jeanselmei | Styrene Pathway |
| Flavobacterium sp. | Parathion (an/aerobic) Pathway |
| Flavobacterium sp. | Glyphosate Pathway |
| Flavobacterium sp. | Asulam Pathway |
| Flavobacterium sp. | Thiophene-2-carboxylate Pathway |
| Flavobacterium sp. | 2,4-Dichlorophenoxyacetic Acid Pathway |
| Flavobacterium sp. | Bromoxynil (an/aerobic) Pathway |
| Flavobacterium sp. ATCC 27551 | Parathion (an/aerobic) Pathway |
| Flavobacterium sp. ATCC 39723 | Pentachlorophenol Family Pathway |
| Fusarium graminearum | Carbofuran Pathway |
| Fusarium oxysporum | 2-Nitropropane Pathway |
| Fusarium oxysporum | Quercetin Pathway |
| Fusarium oxysporum | Organosilicone (an/aerobic) Pathway |
| Geobacter sulfurreducens | Technetium Immobilization Pathway |
| Gordona sp. strain 213E | Benzothiophene Desulfurization Pathway |
| Hormonema sp. | Limonene Pathway |
| Hydrogenophaga palleroni | 4-Carboxy-4'-Sulfoazobenzene Pathway |
| Hydrogenophaga palleronii | 2,4-Dinitrotoluene Pathway |
| Hydrogenophaga palleronii S5 | Nitrobenzene Pathway |
| Hyphomicrobium sp. DM2 | Dichloromethane Pathway |
| Hyphomicrobium sp. EG | Dimethyl Sulfoxide & Organosulfide Cycle Pathway |
| Hyphomicrobium sp. S | Dimethyl Sulfoxide & Organosulfide Cycle Pathway |
| Klebsiella oxytoca Sc | Dimethylisophthalate Pathway |
| Klebsiella pneumoniae | Bromoxynil (an/aerobic) Pathway |
| Klebsiella pneumoniae | Benzonitrile Pathway |
| Klebsiella pneumoniae NCIB 12204 | Acetylene Pathway |
| Klebsiella pneumoniae subsp. | 1,1,1-Trichloro-2,2-bis-(4'-chlorophenyl)ethane (DDT) (anaerobic) Pathway |
| Klebsiella spp. | Caffeine Pathway |
| Kuenenia stuttgartiensis | Nitrate (anaerobic) Pathway |
| Lactobacillus acidophilus | 2,4,6-Trinitrotoluene (anaerobic) Pathway |
| Lactobacillus casei | 2,4,6-Trinitrotoluene (anaerobic) Pathway |
| Lactobacillus delbrueckii | 2,4,6-Trinitrotoluene (anaerobic) Pathway |
| Listeria monocytogenes | Fosfomycin Pathway |
| Mesorhizobium loti | Pyridoxine Pathway |
| Methanobacterium thermoautotrophicum | Methanogenesis Pathway |
| Methanobacterium thermoautotrophicum | Carbon Tetrachloride (anaerobic) Pathway |
| Methanosarcina barkeri | Carbon Tetrachloride (anaerobic) Pathway |
| Methanosarcina thermophila | Tetrachloroethene (anaerobic) Pathway |
| Methylobacterium mesophilicum | Methyl tert-butyl ether Pathway |
| Methylobacterium sp. DM4 | Dichloromethane Pathway |
| Methylococcus capsulatus | Thiocyanate Pathway |
| Methylophilus sp. DM11 | Dichloromethane Pathway |
| Methylosinus trichosporium OB3b | N-Nitrosodimethylamine Pathway |
| Methylosinus trichosporium OB3b | Trichloroethylene Pathway |
| Microbacterium luteolum YK-1 | Pyridoxine Pathway |
| Moorella thermoacetica | 2,4,6-Trinitrotoluene (anaerobic) Pathway |
| Moraxella sp. | Nitrophenol Family (an/aerobic) Pathway |
| Moraxella sp. ASL4 | Naphthalenesulfonate Family Pathway |
| Moraxella sp. DAK3 | 2-Chloro-N-isopropylacetanilide Pathway |
| Moraxella sp. G | Nitrobenzene Pathway |
| Moraxella sp. G | 2,4-Dichloroaniline Pathway |
| Morchella costata | 1,5-Anhydro-D-fructose (Fungal) Pathway |
| Morchella vulgaris | 1,5-Anhydro-D-fructose (Fungal) Pathway |
| Mycobacterium aurum M01 | Morpholine Pathway |
| Mycobacterium austroafricanum IFP 2012 | Methyl tert-butyl ether Pathway |
| Mycobacterium austroafricanum IFP 2173 | Isooctane Pathway |
| Mycobacterium bovis BCG 1173P2 | Isoniazid Pathway |
| Mycobacterium fortuitum | Isoniazid Pathway |
| Mycobacterium phlei WU-0103 | Benzothiophene Desulfurization Pathway |
| Mycobacterium smegmatis | Isoniazid Pathway |
| Mycobacterium sp. ESD | Endosulfan Pathway |
| Mycobacterium sp.RJGII-135 | Benzo[a]pyrene Pathway |
| Mycobacterium tuberculosis | Thiobenzamide Pathway |
| Mycobacterium tuberculosis | Isoniazid Pathway |
| Mycobacterium tuberculosis H37Rv | Isoniazid Pathway |
| Mycobacterium vaccae JOB-5 | N-Nitrosodimethylamine Pathway |
| Mycobacterium vaccae JOB5 | Methyl tert-butyl ether Pathway |
| Mycobacterium vanbaalenii PYR-1 | Anthracene Pathway |
| Mycobacterium vanbaalenii PYR-1 | Pyrene Pathway |
| Mycobacterium vanbaalenii PYR-1 | Benzo[a]pyrene Pathway |
| Mycobacterium vanbaalenii PYR-1 | Phthalate Family Pathway |
| Myrothecium verrucaria | Cyanamide Pathway |
| Neurospora crassa | 2-Nitropropane Pathway |
| Nitrosomonas europaea | Methyl fluoride Pathway |
| Nitrosomonas europaea | Dimethyl ether Pathway |
| Nocardia sp. | alpha-Pinene Pathway |
| Nocardia sp. B-1 | Parathion (an/aerobic) Pathway |
| Nocardia sp. ENV425 | Methyl tert-butyl ether Pathway |
| Nocardia sp. LSU-169 | Methyl ethyl ketone Pathway |
| Nocardia sp. TW2 | Parathion (an/aerobic) Pathway |
| Nocardioides sp. SG-4G | Benomyl Pathway |
| Nostoc ellipsosporum | gamma-1,2,3,4,5,6-Hexachlorocyclohexane Pathway |
| Novosphingobium sp. FND-3 | Carbofuran Pathway |
| Ochrobactrum anthropi | 2,4-Dinitrotoluene Pathway |
| Paenibacillus sp. strain A11-2 | Benzothiophene Desulfurization Pathway |
| Paracoccus denitrificans | 3-Fluorobenzoate Pathway |
| Paracoccus denitrificans | Thiocyanate Pathway |
| Paracoccus denitrificans | Nitrate (anaerobic) Pathway |
| Paracoccus denitrificans 3CA | 2,4-Dichloroaniline Pathway |
| Pelobacter acetylenicus | Acetylene Pathway |
| Penicillium commune | Caffeine (fungal) Pathway |
| Penicillium digitatum | Limonene Pathway |
| Penicillium simplicissimum | Vanillin Pathway |
| Penicillium velutinum | Diazepam Pathway |
| Peziza ostracoderma | 1,5-Anhydro-D-fructose (Fungal) Pathway |
| Phanerochaete chrysosporium | Anthracene (fungal) Pathway |
| Phanerochaete chrysosporium ATCC 24725 | Phenanthrene (fungal 9S,10S) Pathway |
| Phanerochaete chrysosporium ATCC 34541 | Phenanthrene (fungal 9S,10S) Pathway |
| Pleurotus ostreatus | Anthracene (fungal) Pathway |
| Pleurotus ostreatus | Phenanthrene (fungal 9R,10R) Pathway |
| Proteobacteria alpha subclass M2 | Methanesulfonic Acid Pathway |
| Proteobacteria gamma subclass | Nitrilotriacetate (an/aerobic) Pathway |
| Proteobacteria sp. EB1 | Ethylbenzene (anaerobic) Pathway |
| Proteus vulgaris | 1,1,1-Trichloro-2,2-bis-(4'-chlorophenyl)ethane (DDT) (anaerobic) Pathway |
| Pseudomonas acidovorans M3GY | 1,1,1-Trichloro-2,2-bis-(4'-chlorophenyl)ethane (DDT) Pathway |
| Pseudomonas aeruginosa | Benzoate Pathway |
| Pseudomonas aeruginosa | Caprolactam Pathway |
| Pseudomonas aeruginosa | Branched Chain Dodecylbenzene Sulfonate Pathway |
| Pseudomonas aeruginosa | Fosfomycin Pathway |
| Pseudomonas aeruginosa | Citronellol Pathway |
| Pseudomonas aeruginosa | Endosulfan Pathway |
| Pseudomonas aeruginosa | Isoniazid Pathway |
| Pseudomonas aeruginosa | Thiocyanate Pathway |
| Pseudomonas aeruginosa | Geraniol Pathway |
| Pseudomonas aeruginosa | 2,4-Dinitrotoluene Pathway |
| Pseudomonas aeruginosa ATCC 15692 | Triphenyltin Pathway |
| Pseudomonas aeruginosa MAO1 | Trinitrotoluene Pathway |
| Pseudomonas aeruginosa PA012 | Isoniazid Pathway |
| Pseudomonas alcaligenes | N-Oleoyl-N-methyltaurine Pathway |
| Pseudomonas alcaligenes NCIB 9867 | m-Cresol Pathway |
| Pseudomonas aureofaciens | 2-Aminobenzoate Pathway |
| Pseudomonas cepacia | Phthalate Family Pathway |
| Pseudomonas cepacia P166 | 2,4-Dichlorophenoxyacetic Acid Pathway |
| Pseudomonas chlororaphis ATCC 9446 | Triphenyltin Pathway |
| Pseudomonas chlororaphis B23 | Acrylonitrile Pathway |
| Pseudomonas chlororaphis CNR15 | Triphenyltin Pathway |
| Pseudomonas chlororaphis RW71 | Tetrachlorobenzene Pathway |
| Pseudomonas cichorii 170 | 3-Chloroacrylic Acid Pathway |
| Pseudomonas cichorii 170 | 1,3-Dichloropropene Pathway |
| Pseudomonas citronellolis | Geraniol Pathway |
| Pseudomonas citronellolis | Citronellol Pathway |
| Pseudomonas fluorescens | Organomercury Pathway |
| Pseudomonas fluorescens | Trinitrotoluene Pathway |
| Pseudomonas fluorescens | alpha-Pinene Pathway |
| Pseudomonas fluorescens ACB | 4-Hydroxyacetophenone Pathway |
| Pseudomonas fluorescens ATCC 13525 | Triphenyltin Pathway |
| Pseudomonas fluorescens I-C | Nitroglycerin Pathway |
| Pseudomonas gladioli | Limonene Pathway |
| Pseudomonas mendocina | Citronellol Pathway |
| Pseudomonas mendocina | Geraniol Pathway |
| Pseudomonas mendocina KR1 | N-Nitrosodimethylamine Pathway |
| Pseudomonas mendocina KR1 | Toluene Pathway |
| Pseudomonas mendocina pTOL | Toluene Pathway |
| Pseudomonas mendocina pWWO | Toluene Pathway |
| Pseudomonas oleovorans | n-Octane Pathway |
| Pseudomonas oleovorans | Dodecyl sulfate Pathway |
| Pseudomonas pickettii PK01 | Toluene Pathway |
| Pseudomonas pseudoalcaligenes JS45 | Nitrobenzene Pathway |
| Pseudomonas pseudoalcaligenes JS52 | Trinitrotoluene Pathway |
| Pseudomonas pseudoalcaligenes KF707 | 4-Chlorobiphenyl Pathway |
| Pseudomonas putida | Caffeine Pathway |
| Pseudomonas putida | Orcinol Pathway |
| Pseudomonas putida | p-Xylene Pathway |
| Pseudomonas putida | Methionine and Threonine Pathway |
| Pseudomonas putida | Vanillin Pathway |
| Pseudomonas putida | Toluene Pathway |
| Pseudomonas putida | Limonene Pathway |
| Pseudomonas putida | Dibenzothiophene Degradation Pathway |
| Pseudomonas putida | Bromoxynil (an/aerobic) Pathway |
| Pseudomonas putida | Benzoate Pathway |
| Pseudomonas putida | alpha-Pinene Pathway |
| Pseudomonas putida | Nitrophenol Family (an/aerobic) Pathway |
| Pseudomonas putida 39/D | Ethylbenzene Pathway |
| Pseudomonas putida ATCC 12633 | Mandelate Pathway |
| Pseudomonas putida ATCC 17453 | (+)-Camphor Pathway |
| Pseudomonas putida CA-3 | Styrene Pathway |
| Pseudomonas putida CAM | Methyl tert-butyl ether Pathway |
| Pseudomonas putida CBB5 | Caffeine (fungal) Pathway |
| Pseudomonas putida CSV86 | 1-Methylnaphthalene Pathway |
| Pseudomonas putida CSV86 | 2-Methylnaphthalene Pathway |
| Pseudomonas putida DTB | N,N-Diethyl-m-toluamide Pathway |
| Pseudomonas putida F1 | Trichloroethylene Pathway |
| Pseudomonas putida F1 | Toluene Pathway |
| Pseudomonas putida F1 | p-Cymene Pathway |
| Pseudomonas putida Fu1 | Furfural Pathway |
| Pseudomonas putida II-B | Nitroglycerin Pathway |
| Pseudomonas putida JD1 | 4-Hydroxyacetophenone Pathway |
| Pseudomonas putida mt-2 | m-Xylene Pathway |
| Pseudomonas putida mt-2 | Nitrobenzene Pathway |
| Pseudomonas putida mt-2 | Toluene Pathway |
| Pseudomonas putida N19-2 | N-Cyclohexylisocyanide Pathway |
| Pseudomonas putida NCIB 9869 | m-Cresol Pathway |
| Pseudomonas putida PgG 786 | Tetralin Pathway |
| Pseudomonas putida PL | p-Cymene Pathway |
| Pseudomonas putida PpG1 (ATCC 17453) | Adamantanone Pathway |
| Pseudomonas putida S-313 | Toluene-4-sulfonate Pathway |
| Pseudomonas rhodesiae KK1 | Anthracene Pathway |
| Pseudomonas savastanoi | Trinitrotoluene Pathway |
| Pseudomonas sp. | 2,4-Dichloroaniline Pathway |
| Pseudomonas sp. | Limonene Pathway |
| Pseudomonas sp. | 1,4-Dichlorobenzene Pathway |
| Pseudomonas sp. | Dimethyl Sulfoxide & Organosulfide Cycle Pathway |
| Pseudomonas sp. | Dichloromethane Pathway |
| Pseudomonas sp. | 2-Aminobenzoate Pathway |
| Pseudomonas sp. | Asulam Pathway |
| Pseudomonas sp. (pBS1001) | Caprolactam Pathway |
| Pseudomonas sp. 192 | Atrazine Pathway |
| Pseudomonas sp. 194 | Atrazine Pathway |
| Pseudomonas sp. 50432 | Carbofuran Pathway |
| Pseudomonas sp. A | N-Cyclopropylmelamine Pathway |
| Pseudomonas sp. A 2NT- | Trinitrotoluene Pathway |
| Pseudomonas sp. A2279 | Acenaphthylene Pathway |
| Pseudomonas sp. A3 | Naphthalenesulfonate Family Pathway |
| Pseudomonas sp. ACP | 1-Aminocyclopropane-1-carboxylate Pathway |
| Pseudomonas sp. ADP | Atrazine Pathway |
| Pseudomonas sp. B1 | Hexadecyltrimethylammonium Chloride Pathway |
| Pseudomonas sp. B13 | 3-Fluorobenzoate Pathway |
| Pseudomonas sp. B13 | 4-Fluorobenzoate (an/aerobic) Pathway |
| Pseudomonas sp. BC | Acenaphthylene Pathway |
| Pseudomonas sp. BN6 | Mordant Yellow 3 Pathway |
| Pseudomonas sp. BN9 | Mordant Yellow 3 Pathway |
| Pseudomonas sp. BR | Acenaphthylene Pathway |
| Pseudomonas sp. C22 | Naphthalenesulfonate Family Pathway |
| Pseudomonas sp. C4, C5 and C6 | Carbaryl Pathway |
| Pseudomonas sp. CA10 | Carbazole Pathway |
| Pseudomonas sp. CBS3 | Tyrosine Pathway |
| Pseudomonas sp. CBS3 | 2,4-Dichlorobenzoate Pathway |
| Pseudomonas sp. CBW | Benomyl Pathway |
| Pseudomonas sp. CPE2 | Benzoate Pathway |
| Pseudomonas sp. FB1024 | 2-Mercaptobenzothiazole Pathway |
| Pseudomonas sp. GCH1 | 2-Chloro-N-isopropylacetanilide Pathway |
| Pseudomonas sp. IA | Pyridoxine Pathway |
| Pseudomonas sp. JL2 | 2,4-Dichloroaniline Pathway |
| Pseudomonas sp. JS150 | Chlorobenzene Pathway |
| Pseudomonas sp. JS6 | Chlorobenzene Pathway |
| Pseudomonas sp. JTS-0006 | Nicotine Pathway |
| Pseudomonas sp. K 172 | 2-Aminobenzoate (anaerobic) Pathway |
| Pseudomonas sp. KB 740 | 2-Aminobenzoate (anaerobic) Pathway |
| Pseudomonas sp. KB 740 | 2-Aminobenzoate Pathway |
| Pseudomonas sp. LB400 | Biphenyl Pathway |
| Pseudomonas sp. LB400 | 4-Chlorobiphenyl Pathway |
| Pseudomonas sp. MA-1 | Pyridoxine Pathway |
| Pseudomonas sp. NCIB 10643 | Ethylbenzene Pathway |
| Pseudomonas sp. NCIB 9816-4 | Ethylbenzene Pathway |
| Pseudomonas sp. NCIB 9816-4 | Naphthalene Pathway |
| Pseudomonas sp. NCIB 9816/11 | Fluorene Pathway |
| Pseudomonas sp. NCIB G7 | Naphthalene Pathway |
| Pseudomonas sp. NRRLB-12227 | Atrazine Pathway |
| Pseudomonas sp. NRRLB-12228 | Atrazine Pathway |
| Pseudomonas sp. P-34 | Nicotine Pathway |
| Pseudomonas sp. P51 | Chlorobenzene Pathway |
| Pseudomonas sp. PEM1 | 2-Chloro-N-isopropylacetanilide Pathway |
| Pseudomonas sp. PF12 | 2-Mercaptobenzothiazole Pathway |
| Pseudomonas sp. PF4 | 2-Mercaptobenzothiazole Pathway |
| Pseudomonas sp. PJ 874 | Tyrosine Pathway |
| Pseudomonas sp. RHO1 | Chlorobenzene Pathway |
| Pseudomonas sp. s47p1 | Phenanthrene Pathway |
| Pseudomonas sp. s7k5 | Phenanthrene Pathway |
| Pseudomonas sp. TNT-32 | Trinitrotoluene Pathway |
| Pseudomonas sp. TNT-8 | Trinitrotoluene Pathway |
| Pseudomonas spp. | Benomyl Pathway |
| Pseudomonas stutzeri AS39 | Tetralin Pathway |
| Pseudomonas stutzeri KC | Carbon Tetrachloride (anaerobic) Pathway |
| Pseudonocardia benzenivorans B5 | 1,4-Dioxane Pathway |
| Pseudonocardia dioxanivorans CB1190 | 1,4-Dioxane Pathway |
| Pseudonocardia sp. K1 | Tetrahydrofuran Pathway |
| Ralstonia eutropha | Nitrophenol Family (an/aerobic) Pathway |
| Ralstonia eutropha | 2,4-Dichlorophenoxyacetic Acid Pathway |
| Ralstonia eutropha A5 | 1,1,1-Trichloro-2,2-bis-(4'-chlorophenyl)ethane (DDT) Pathway |
| Ralstonia pickettii PKO1 | N-Nitrosodimethylamine Pathway |
| Ralstonia pickettii TA | Thioacetamide Pathway |
| Ralstonia pickettii TA | Thiobenzamide Pathway |
| Ralstonia sp. M91-3 | Atrazine Pathway |
| Ralstonia sp. SLRS7 | Imidosuccinate Pathway |
| Rhizobium huakuii | Fosfomycin Pathway |
| Rhizobium sp. CU-A1 | Acenaphthylene Pathway |
| Rhodobacter sphaeroides | Dimethyl Sulfoxide & Organosulfide Cycle Pathway |
| Rhodococcus corallinus NRRLB-15444R | Atrazine Pathway |
| Rhodococcus erythropolis | Endosulfan Pathway |
| Rhodococcus erythropolis 5D | Dimethylisophthalate Pathway |
| Rhodococcus erythropolis AN-13 | Nitrobenzene Pathway |
| Rhodococcus erythropolis DCL14 | Limonene Pathway |
| Rhodococcus globerulus CL1 | Cyclohexane Pathway |
| Rhodococcus jialingiae djl-6-2 | Benomyl Pathway |
| Rhodococcus opacus | Tetrahydrofuran Pathway |
| Rhodococcus opacus | Acetylene Pathway |
| Rhodococcus rhodochrous | Acetylene Pathway |
| Rhodococcus rhodochrous | Bromoxynil (an/aerobic) Pathway |
| Rhodococcus rhodochrous | Cyclopropanecarboxylate Pathway |
| Rhodococcus rhodochrous J1 | Benzonitrile Pathway |
| Rhodococcus rhodochrous K22 | Acrylonitrile Pathway |
| Rhodococcus rhodochrous NCIMB 13259 | Styrene Pathway |
| Rhodococcus rhodochrous OBT18 | 2-Mercaptobenzothiazole Pathway |
| Rhodococcus ruber 1B | Dimethylisophthalate Pathway |
| Rhodococcus sp. | Thiophene-2-carboxylate Pathway |
| Rhodococcus sp. | Acetylene Pathway |
| Rhodococcus sp. | Methyl tert-butyl ether Pathway |
| Rhodococcus sp. | Anthracene Pathway |
| Rhodococcus sp. 0246b | Metamitron Pathway |
| Rhodococcus sp. IGTS8 | Dibenzothiophene Desulfurization Pathway |
| Rhodococcus sp. NI86/21 | Atrazine Pathway |
| Rhodococcus sp. strain WU-K2R | Benzothiophene Desulfurization Pathway |
| Rhodococcus sp. strain YU6 | o-Xylene Pathway |
| Rhodococcus sp. strain YU6 | p-Xylene Pathway |
| Rhodococcus sp. TE1 | Atrazine Pathway |
| Rhodococcus spp. | Caffeine Pathway |
| Rhodococcus TEI | Carbofuran Pathway |
| Rhodopseudomonas palustris | Benzoate (anaerobic) Pathway |
| Rhodotorula graminis | Benzoate Pathway |
| Salmonella choleraesuis | n-Octane Pathway |
| Salmonella choleraesuis | 2,4,6-Trinitrotoluene (anaerobic) Pathway |
| Sarcina sp. | Isoniazid Pathway |
| Sedimentibacter sp. | beta-1,2,3,4,5,6-Hexachlorocyclohexane (an/aerobic) Pathway |
| Serratia marcescens | Caffeine Pathway |
| Shewanella oneidensis | Technetium Immobilization Pathway |
| Shewanella putrefaciens | Technetium Immobilization Pathway |
| Sinorhizobium sp. KT55 | Benzothiophene Desulfurization Pathway |
| Sphingobium cloacae | 4-(1-Ethyl-1,4-dimethyl-pentyl)phenol Pathway |
| Sphingobium yanoikuyae | Benzo[a]pyrene Pathway |
| Sphingobium yanoikuyae FM-2 | Bisphenol F Pathway |
| Sphingomonas haloaromaticamans | 1,4-Dichlorobenzene Pathway |
| Sphingomonas paucimobilis EPA 505 | Anthracene Pathway |
| Sphingomonas paucimobilis UT26 | beta-1,2,3,4,5,6-Hexachlorocyclohexane (an/aerobic) Pathway |
| Sphingomonas paucimobilis UT26 | gamma-1,2,3,4,5,6-Hexachlorocyclohexane Pathway |
| Sphingomonas sp. | 4-(1-Ethyl-1,4-dimethyl-pentyl)phenol Pathway |
| Sphingomonas sp. | Carbofuran Pathway |
| Sphingomonas sp. A4 | Acenaphthylene Pathway |
| Sphingomonas sp. CB3 | Carbazole Pathway |
| Sphingomonas sp. HB-1 | 3-Fluorobenzoate Pathway |
| Sphingomonas sp. HH19k | Dibenzofuran Pathway |
| Sphingomonas sp. LB 126 | Anthracene Pathway |
| Sphingomonas sp. RW1 | Dibenzofuran Pathway |
| Sphingomonas sp. RW1 | Dibenzo-p-dioxin Pathway |
| Sphingomonas sp. SRS2 | Isoproturon Pathway |
| Sphingomonas TTNP3 | 4-(1-Ethyl-1,4-dimethyl-pentyl)phenol Pathway |
| Sphingomonas wittichii RW1 | Nitrofen Pathway |
| Sphingomonas xenophaga | 4-(1-Ethyl-1,4-dimethyl-pentyl)phenol Pathway |
| Sphingomonas xenophaga SKN | Benzoate Pathway |
| Sphingomonas xenophagum | 4-(1-Ethyl-1,4-dimethyl-pentyl)phenol Pathway |
| Sphingomonas xenophagum 14677 | 4-(1-Ethyl-1,4-dimethyl-pentyl)phenol Pathway |
| Sphingomonas xenophagum 6383 | 4-(1-Ethyl-1,4-dimethyl-pentyl)phenol Pathway |
| Sphingomonas xenophagum 6985 | 4-(1-Ethyl-1,4-dimethyl-pentyl)phenol Pathway |
| Sphingomonas xenophagum 8566 | 4-(1-Ethyl-1,4-dimethyl-pentyl)phenol Pathway |
| Sphingomonas yanoikuyae | m-Xylene Pathway |
| Sphingopyxis macrogoltabida TFA | Tetralin Pathway |
| Sporomusa ovata | Tetrachloroethene (anaerobic) Pathway |
| Staphylococcus aureus | Arsonoacetate Pathway |
| Staphylococcus auricularis DBF63 | Fluorene Pathway |
| Staphylococcus auricularis DBF63 | Dibenzofuran Pathway |
| Staphylococcus sp. | Trinitrotoluene Pathway |
| Stenotrophomonas maltophilia | Endosulfan Pathway |
| Stenotrophomonas maltophilia CSV89 | 1-Naphthoic Acid Pathway |
| Stenotrophomonas sp. RMSK | Acenaphthylene Pathway |
| strain H45-2 | Thiophene-2-carboxylate Pathway |
| Streptomyces flavovirens | Phenanthrene Pathway |
| Streptomyces viridifaciens MG456-hF10 | Valanimycin Synthesis Pathway |
| sulfate-reducing enrichment culture N47 | 2-Methylnaphthalene (anaerobic) Pathway |
| Sulfurospirillum barnesii SES-3 | Selenate Pathway |
| Syncephalastrum racemosum UT-70 | Phenanthrene (fungal 9R,10R) Pathway |
| Synechococcus sp. | 1,1,1-Trichloro-2,2-bis-(4'-chlorophenyl)ethane (DDT) (anaerobic) Pathway |
| Synechococcus sp. PR-6 | Phenanthrene Pathway |
| Terrabacter sp. DPO360 | Dibenzofuran Pathway |
| Tetrathiobacter mimigardefordensis | 3,3'-Dithiodipropionate Pathway |
| Thauera aromatica | Toluene (anaerobic) Pathway |
| Thauera aromatica K172 | Benzoate (anaerobic) Pathway |
| Thauera aromatica K172 | Phenol (anaerobic) Pathway |
| Thauera terpenica strain 21Mol | Menthol (anaerobic) Pathway |
| Thielevia sp. | 2,4-Dinitrotoluene Pathway |
| Thiobacillus thioparus THI 115 | Thiocyanate Pathway |
| Trametes versicolor | Anthracene (fungal) Pathway |
| Trichodesmium erythraeum IMS101
| Starch Oligomer Pathway |
| Trichosporon cutaneum | Nitrobenzene Pathway |
| Variovorax paradoxus JS171 | 3-Nitrotyrosine Family Pathway |
| Variovorax paradoxus T4 | Dimethylisophthalate Pathway |
| Veillonella atypica | Osmium Reduction Pathway |
| Vibrio sp. YC1 | Thiophene-2-carboxylate Pathway |
| Williopsis saturnus | 1-Aminocyclopropane-1-carboxylate Pathway |
| Williopsis saturnus var. mrakii | 2-Nitropropane Pathway |
| Xanthobacter autotrophicus GJ10 | 1,2-Dichloroethane Pathway |
| Xanthobacter flavus 14pl | 1,4-Dichlorobenzene Pathway |
| Xanthobacter sp. | Dimethylisophthalate Pathway |
| Xanthobacter sp. MAB2 | 2-Chloro-N-isopropylacetanilide Pathway |
| Xanthobacter sp. Py2 | Propylene Pathway |
| Xanthobacter sp. Py2 | 2-Nitropropane Pathway |
| Xanthobacter tagetidis | Thiophene-2-carboxylate Pathway |
| Yarrowia lipolytica | Limonene Pathway |